BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D02SP1|AL426350
(761 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1674 858 0.0
>3x_Contig1674
Length = 12281
Score = 858 bits (429), Expect = 0.0
Identities = 464/481 (96%)
Strand = Plus / Plus
Query: 281 aacaatgtagacataaatttaggtttcgctaacaaataatcaaccgttggtagcttgtta 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacaatgtagacataaatttaggtttcgctaacaaataatcaaccgttggtagcttgtat 60
Query: 341 tccttagatctacccaaacatatgcratatatcatagctacgtctttcctcgcctcaaaa 400
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 cccttagatctacccaaacatatgcaatatatcatagctacgtctttcctcgcctcaaaa 120
Query: 401 tcgagattggggaacgaatgcgacaacataaagaraagatctgattgatatatgggatra 460
||||||||||||||||||||| ||||||||||| |||||||||||||||||||| || |
Sbjct: 121 tcgagattggggaacgaatgcagcaacataaagaaaagatctgattgatatatggaataa 180
Query: 461 taaagctcgtctagcgcctcttgcgtgggtaccgggtctgtctccttcaatrarragtgt 520
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 181 taaagctcgtctagcgcctcttgcgtgggtaccgggtctgtctccttcaataaaaagtgt 240
Query: 521 ttcgttcctgcgatatgtctgccacattcatcctgtgccttcttacggttatcgcttcca 580
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcgttcctgcaatatgtctgccacattcatcctgtgccttcttacggttatcgcttcca 300
Query: 581 atactagaggactccaatttgtctaactgctcgatcaaatgtctaamataatcactagga 640
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 301 atactagaggactccaatttgtctaactgctcgatcaaatgtctaacataatcactagga 360
Query: 641 gtcttgggactcttcttccaccaaaaagccatcgtgtcgatacaagtttgawatcttaga 700
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 361 gtcttgggactcttcttccaccaaaaagccatcgtgtcgatacaagtttgaaatcttaga 420
Query: 701 ttactttggtttaccgcccttcaataacgctcgctcacactagaataaagagattatgga 760
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 421 ttactttggtttaccgcccttcaataacgctcgctcacactagaataacgagcttatgga 480
Query: 761 t 761
|
Sbjct: 481 t 481
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3999
Number of Sequences: 1807
Number of extensions: 3999
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 761
length of database: 10,358,551
effective HSP length: 16
effective length of query: 745
effective length of database: 10,329,639
effective search space: 7695581055
effective search space used: 7695581055
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)